Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM3P06753 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 RNU1-129P-201ENST00000384064 167 ntBASIC17.88■□□□□ 0.45
TPM3P06753 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 U1.21-201ENST00000580816 167 ntBASIC17.88■□□□□ 0.45
TPM3P06753 AL031055.1-201ENST00000606362 631 ntBASIC17.88■□□□□ 0.45
TPM3P06753 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM3P06753 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.88■□□□□ 0.45
TPM3P06753 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
TPM3P06753 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TPM3P06753 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TPM3P06753 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM3P06753 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TPM3P06753 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TPM3P06753 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.87■□□□□ 0.45
TPM3P06753 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 KRT18P31-201ENST00000506277 1292 ntBASIC17.87■□□□□ 0.45
TPM3P06753 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.87■□□□□ 0.45
TPM3P06753 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.87■□□□□ 0.45
TPM3P06753 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.87■□□□□ 0.45
TPM3P06753 AC021087.4-201ENST00000563761 564 ntBASIC17.87■□□□□ 0.45
TPM3P06753 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM3P06753 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM3P06753 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TPM3P06753 KRT8P44-201ENST00000441609 1350 ntBASIC17.87■□□□□ 0.45
TPM3P06753 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM3P06753 AC138969.2-201ENST00000532739 9932 ntBASIC17.87■□□□□ 0.45
TPM3P06753 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM3P06753 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM3P06753 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TPM3P06753 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
TPM3P06753 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TPM3P06753 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TPM3P06753 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 MRPL20P1-201ENST00000400819 433 ntBASIC17.86■□□□□ 0.45
TPM3P06753 KRT18P27-201ENST00000427733 1299 ntBASIC17.86■□□□□ 0.45
TPM3P06753 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.86■□□□□ 0.45
TPM3P06753 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 IGHV3-65-201ENST00000523210 341 ntBASIC17.86■□□□□ 0.45
TPM3P06753 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.86■□□□□ 0.45
TPM3P06753 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM3P06753 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.86■□□□□ 0.45
TPM3P06753 LINC01711-201ENST00000598340 967 ntBASIC17.86■□□□□ 0.45
TPM3P06753 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM3P06753 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.86■□□□□ 0.45
TPM3P06753 REXO1L6P-202ENST00000619970 1078 ntBASIC17.86■□□□□ 0.45
TPM3P06753 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms