Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CD74P04233 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD74P04233 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CD74P04233 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD74P04233 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.39□□□□□ -0.27
CD74P04233 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD74P04233 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD74P04233 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CD74P04233 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CD74P04233 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CD74P04233 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.38□□□□□ -0.27
CD74P04233 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.38□□□□□ -0.27
CD74P04233 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.38□□□□□ -0.27
CD74P04233 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 KRT18P31-201ENST00000506277 1292 ntBASIC13.38□□□□□ -0.27
CD74P04233 KRT18P35-201ENST00000510488 1269 ntBASIC13.38□□□□□ -0.27
CD74P04233 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 AL031432.2-201ENST00000566714 459 ntBASIC13.38□□□□□ -0.27
CD74P04233 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.38□□□□□ -0.27
CD74P04233 AL928711.1-201ENST00000570165 459 ntBASIC13.38□□□□□ -0.27
CD74P04233 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.38□□□□□ -0.27
CD74P04233 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.38□□□□□ -0.27
CD74P04233 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CD74P04233 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.38□□□□□ -0.27
CD74P04233 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
CD74P04233 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
CD74P04233 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.38□□□□□ -0.27
CD74P04233 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.38□□□□□ -0.27
CD74P04233 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CD74P04233 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.38□□□□□ -0.27
CD74P04233 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CD74P04233 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD74P04233 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 AC073439.1-201ENST00000624121 1774 ntBASIC13.37□□□□□ -0.27
CD74P04233 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.37□□□□□ -0.27
CD74P04233 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.37□□□□□ -0.27
CD74P04233 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CD74P04233 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 AC109635.5-201ENST00000533593 962 ntBASIC13.37□□□□□ -0.27
CD74P04233 AC243562.2-201ENST00000561247 970 ntBASIC13.37□□□□□ -0.27
CD74P04233 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 AC008608.2-201ENST00000606089 416 ntBASIC13.37□□□□□ -0.27
CD74P04233 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
CD74P04233 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
CD74P04233 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.37□□□□□ -0.27
CD74P04233 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD74P04233 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD74P04233 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD74P04233 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.36□□□□□ -0.27
CD74P04233 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms