Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SPTA1P02549 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTA1P02549 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.33□□□□□ -0.12
SPTA1P02549 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTA1P02549 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SPTA1P02549 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTA1P02549 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
SPTA1P02549 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.33□□□□□ -0.12
SPTA1P02549 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.33□□□□□ -0.12
SPTA1P02549 AC016700.1-201ENST00000429424 312 ntBASIC14.33□□□□□ -0.12
SPTA1P02549 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTA1P02549 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.33□□□□□ -0.12
SPTA1P02549 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.33□□□□□ -0.12
SPTA1P02549 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.33□□□□□ -0.12
SPTA1P02549 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
SPTA1P02549 MIR6756-201ENST00000616240 63 ntBASIC14.33□□□□□ -0.12
SPTA1P02549 AC091812.3-201ENST00000621362 345 ntBASIC14.33□□□□□ -0.12
SPTA1P02549 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTA1P02549 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTA1P02549 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTA1P02549 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SPTA1P02549 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.33□□□□□ -0.12
SPTA1P02549 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SPTA1P02549 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.33□□□□□ -0.12
SPTA1P02549 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SPTA1P02549 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTA1P02549 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTA1P02549 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
SPTA1P02549 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTA1P02549 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTA1P02549 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
SPTA1P02549 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 SLED1-202ENST00000512051 380 ntBASIC14.32□□□□□ -0.12
SPTA1P02549 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTA1P02549 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SPTA1P02549 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.32□□□□□ -0.12
SPTA1P02549 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.32□□□□□ -0.12
SPTA1P02549 MIR4750-201ENST00000584564 56 ntBASIC14.32□□□□□ -0.12
SPTA1P02549 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.32□□□□□ -0.12
SPTA1P02549 MIR4321-201ENST00000592276 80 ntBASIC14.32□□□□□ -0.12
SPTA1P02549 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.32□□□□□ -0.12
SPTA1P02549 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.32□□□□□ -0.12
SPTA1P02549 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTA1P02549 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTA1P02549 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SPTA1P02549 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SPTA1P02549 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms