Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL1A1P02452 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL1A1P02452 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
COL1A1P02452 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
COL1A1P02452 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL1A1P02452 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL1A1P02452 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.83■□□□□ 0.6
COL1A1P02452 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL1A1P02452 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.83■□□□□ 0.6
COL1A1P02452 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.83■□□□□ 0.6
COL1A1P02452 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.83■□□□□ 0.6
COL1A1P02452 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.83■□□□□ 0.6
COL1A1P02452 AC243960.2-201ENST00000600996 747 ntBASIC18.83■□□□□ 0.6
COL1A1P02452 AC093813.1-201ENST00000605066 256 ntBASIC18.83■□□□□ 0.6
COL1A1P02452 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.83■□□□□ 0.6
COL1A1P02452 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.82■□□□□ 0.6
COL1A1P02452 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL1A1P02452 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.82■□□□□ 0.6
COL1A1P02452 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
COL1A1P02452 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.82■□□□□ 0.6
COL1A1P02452 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.82■□□□□ 0.6
COL1A1P02452 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.82■□□□□ 0.6
COL1A1P02452 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 AL391005.1-201ENST00000623953 2435 ntBASIC18.82■□□□□ 0.6
COL1A1P02452 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COL1A1P02452 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL1A1P02452 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL1A1P02452 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.81■□□□□ 0.6
COL1A1P02452 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.81■□□□□ 0.6
COL1A1P02452 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.81■□□□□ 0.6
COL1A1P02452 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.81■□□□□ 0.6
COL1A1P02452 AC007551.1-201ENST00000457394 519 ntBASIC18.81■□□□□ 0.6
COL1A1P02452 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.81■□□□□ 0.6
COL1A1P02452 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.81■□□□□ 0.6
COL1A1P02452 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.81■□□□□ 0.6
COL1A1P02452 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.81■□□□□ 0.6
COL1A1P02452 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 AC010328.2-201ENST00000597698 1111 ntBASIC18.81■□□□□ 0.6
COL1A1P02452 AC009542.2-202ENST00000619004 1067 ntBASIC18.81■□□□□ 0.6
COL1A1P02452 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.81■□□□□ 0.6
COL1A1P02452 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL1A1P02452 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.81■□□□□ 0.6
COL1A1P02452 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COL1A1P02452 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
COL1A1P02452 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.8■□□□□ 0.6
COL1A1P02452 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.8■□□□□ 0.6
COL1A1P02452 AC004945.1-201ENST00000416738 983 ntBASIC18.8■□□□□ 0.6
COL1A1P02452 AC016694.1-201ENST00000434179 700 ntBASIC18.8■□□□□ 0.6
COL1A1P02452 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.8■□□□□ 0.6
COL1A1P02452 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
COL1A1P02452 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.8■□□□□ 0.6
COL1A1P02452 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.8■□□□□ 0.6
COL1A1P02452 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.8■□□□□ 0.6
COL1A1P02452 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.8■□□□□ 0.6
COL1A1P02452 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.8■□□□□ 0.6
COL1A1P02452 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.8■□□□□ 0.6
COL1A1P02452 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL1A1P02452 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL1A1P02452 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.8■□□□□ 0.6
COL1A1P02452 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms