Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DQA1P01909 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 NTF6B-201ENST00000591913 560 ntBASIC12.02□□□□□ -0.49
HLA-DQA1P01909 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.02□□□□□ -0.49
HLA-DQA1P01909 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 Z83836.1-201ENST00000624605 1642 ntBASIC12.01□□□□□ -0.49
HLA-DQA1P01909 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 HAUS4P1-201ENST00000406739 1145 ntBASIC12.01□□□□□ -0.49
HLA-DQA1P01909 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 SIGLEC30P-201ENST00000455569 941 ntBASIC12.01□□□□□ -0.49
HLA-DQA1P01909 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 MPDU1-223ENST00000582151 728 ntBASIC12.01□□□□□ -0.49
HLA-DQA1P01909 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 AC073592.5-201ENST00000624854 528 ntBASIC12.01□□□□□ -0.49
HLA-DQA1P01909 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 U82695.1-201ENST00000635752 1889 ntBASIC12.01□□□□□ -0.49
HLA-DQA1P01909 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HLA-DQA1P01909 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms