Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 AC234782.1-201ENST00000451950 919 ntBASIC17.85■□□□□ 0.45
ALDH1A1P00352 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 AC106794.1-201ENST00000506935 792 ntBASIC17.85■□□□□ 0.45
ALDH1A1P00352 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 LRRC59-203ENST00000576448 1531 ntBASIC17.85■□□□□ 0.45
ALDH1A1P00352 MIR3147-201ENST00000577811 66 ntBASIC17.85■□□□□ 0.45
ALDH1A1P00352 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 RN7SL713P-201ENST00000582127 302 ntBASIC17.85■□□□□ 0.45
ALDH1A1P00352 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 KRT8P29-201ENST00000420409 1371 ntBASIC17.84■□□□□ 0.45
ALDH1A1P00352 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 PGAM1P5-201ENST00000548011 764 ntBASIC17.84■□□□□ 0.45
ALDH1A1P00352 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 RN7SL555P-201ENST00000584742 339 ntBASIC17.84■□□□□ 0.45
ALDH1A1P00352 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.84■□□□□ 0.45
ALDH1A1P00352 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALDH1A1P00352 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ALDH1A1P00352 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ALDH1A1P00352 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ALDH1A1P00352 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ALDH1A1P00352 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ALDH1A1P00352 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ALDH1A1P00352 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 AL354877.1-201ENST00000424412 413 ntBASIC17.83■□□□□ 0.44
ALDH1A1P00352 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALDH1A1P00352 AC006335.1-201ENST00000445200 547 ntBASIC17.83■□□□□ 0.44
ALDH1A1P00352 AC012618.1-201ENST00000461223 412 ntBASIC17.83■□□□□ 0.44
ALDH1A1P00352 AC021723.1-201ENST00000486306 515 ntBASIC17.83■□□□□ 0.44
ALDH1A1P00352 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 AC026740.1-201ENST00000607068 791 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms