Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.37□□□□□ -0.27
ABCA1O95477 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 AC018665.1-201ENST00000622927 1362 ntBASIC13.37□□□□□ -0.27
ABCA1O95477 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ABCA1O95477 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.37□□□□□ -0.27
ABCA1O95477 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 AL133338.1-201ENST00000565695 1517 ntBASIC13.36□□□□□ -0.27
ABCA1O95477 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.36□□□□□ -0.27
ABCA1O95477 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 AC004945.1-201ENST00000416738 983 ntBASIC13.36□□□□□ -0.27
ABCA1O95477 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.36□□□□□ -0.27
ABCA1O95477 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ABCA1O95477 AC026979.3-201ENST00000607315 403 ntBASIC13.36□□□□□ -0.27
ABCA1O95477 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ABCA1O95477 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ABCA1O95477 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.36□□□□□ -0.27
ABCA1O95477 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.36□□□□□ -0.27
ABCA1O95477 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCA1O95477 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.36□□□□□ -0.27
ABCA1O95477 MIR6069-201ENST00000620069 79 ntBASIC13.36□□□□□ -0.27
ABCA1O95477 CDC14C-201ENST00000428251 1719 ntBASIC13.36□□□□□ -0.27
ABCA1O95477 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ABCA1O95477 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 AC005052.1-201ENST00000625181 2492 ntBASIC13.35□□□□□ -0.27
ABCA1O95477 TUBB1P2-201ENST00000422712 1306 ntBASIC13.35□□□□□ -0.27
ABCA1O95477 TUBB1P1-201ENST00000503144 1300 ntBASIC13.35□□□□□ -0.27
ABCA1O95477 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.35□□□□□ -0.27
ABCA1O95477 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ABCA1O95477 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ABCA1O95477 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ABCA1O95477 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.35□□□□□ -0.27
ABCA1O95477 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ABCA1O95477 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.35□□□□□ -0.27
ABCA1O95477 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.35□□□□□ -0.27
ABCA1O95477 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ABCA1O95477 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms