Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.86■□□□□ 0.61
MBD4O95243 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.86■□□□□ 0.61
MBD4O95243 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MBD4O95243 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.86■□□□□ 0.61
MBD4O95243 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.86■□□□□ 0.61
MBD4O95243 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.86■□□□□ 0.61
MBD4O95243 RRP7BP-205ENST00000566851 833 ntBASIC18.86■□□□□ 0.61
MBD4O95243 AC036164.1-201ENST00000570544 333 ntBASIC18.86■□□□□ 0.61
MBD4O95243 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.86■□□□□ 0.61
MBD4O95243 CTBP2P3-201ENST00000585629 1255 ntBASIC18.86■□□□□ 0.61
MBD4O95243 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.86■□□□□ 0.61
MBD4O95243 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.86■□□□□ 0.61
MBD4O95243 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
MBD4O95243 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
MBD4O95243 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MBD4O95243 AC138969.3-201ENST00000546612 1459 ntBASIC18.85■□□□□ 0.61
MBD4O95243 AC138932.2-201ENST00000548268 1459 ntBASIC18.85■□□□□ 0.61
MBD4O95243 AC126755.4-201ENST00000549796 1459 ntBASIC18.85■□□□□ 0.61
MBD4O95243 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MBD4O95243 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
MBD4O95243 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MBD4O95243 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.85■□□□□ 0.61
MBD4O95243 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.85■□□□□ 0.61
MBD4O95243 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 RN7SL399P-201ENST00000471648 279 ntBASIC18.85■□□□□ 0.61
MBD4O95243 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.85■□□□□ 0.61
MBD4O95243 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.85■□□□□ 0.61
MBD4O95243 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MBD4O95243 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.85■□□□□ 0.61
MBD4O95243 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.85■□□□□ 0.61
MBD4O95243 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD4O95243 AL121723.1-201ENST00000445194 1519 ntBASIC18.84■□□□□ 0.61
MBD4O95243 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD4O95243 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD4O95243 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.84■□□□□ 0.61
MBD4O95243 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD4O95243 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
MBD4O95243 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.84■□□□□ 0.61
MBD4O95243 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
MBD4O95243 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.84■□□□□ 0.61
MBD4O95243 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.84■□□□□ 0.61
MBD4O95243 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
MBD4O95243 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms