Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLSTN1O94985 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CLSTN1O94985 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 CNN2P11-201ENST00000429351 262 ntBASIC17.69■□□□□ 0.42
CLSTN1O94985 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.69■□□□□ 0.42
CLSTN1O94985 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.69■□□□□ 0.42
CLSTN1O94985 POU5F1P6-201ENST00000466990 990 ntBASIC17.69■□□□□ 0.42
CLSTN1O94985 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.69■□□□□ 0.42
CLSTN1O94985 AL138918.1-201ENST00000568306 659 ntBASIC17.69■□□□□ 0.42
CLSTN1O94985 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLSTN1O94985 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.69■□□□□ 0.42
CLSTN1O94985 AC004835.2-201ENST00000603762 682 ntBASIC17.69■□□□□ 0.42
CLSTN1O94985 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.69■□□□□ 0.42
CLSTN1O94985 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLSTN1O94985 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLSTN1O94985 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLSTN1O94985 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLSTN1O94985 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLSTN1O94985 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 U82695.1-201ENST00000635752 1889 ntBASIC17.69■□□□□ 0.42
CLSTN1O94985 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.69■□□□□ 0.42
CLSTN1O94985 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.69■□□□□ 0.42
CLSTN1O94985 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLSTN1O94985 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLSTN1O94985 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.68■□□□□ 0.42
CLSTN1O94985 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.68■□□□□ 0.42
CLSTN1O94985 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.68■□□□□ 0.42
CLSTN1O94985 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.68■□□□□ 0.42
CLSTN1O94985 SPCS2P4-201ENST00000436160 681 ntBASIC17.68■□□□□ 0.42
CLSTN1O94985 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CLSTN1O94985 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CLSTN1O94985 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.68■□□□□ 0.42
CLSTN1O94985 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.68■□□□□ 0.42
CLSTN1O94985 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.68■□□□□ 0.42
CLSTN1O94985 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.68■□□□□ 0.42
CLSTN1O94985 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.68■□□□□ 0.42
CLSTN1O94985 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CLSTN1O94985 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLSTN1O94985 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLSTN1O94985 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CLSTN1O94985 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.68■□□□□ 0.42
CLSTN1O94985 AC022145.2-201ENST00000598203 171 ntBASIC17.68■□□□□ 0.42
CLSTN1O94985 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.68■□□□□ 0.42
CLSTN1O94985 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.68■□□□□ 0.42
CLSTN1O94985 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.68■□□□□ 0.42
CLSTN1O94985 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.68■□□□□ 0.42
CLSTN1O94985 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.68■□□□□ 0.42
CLSTN1O94985 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.68■□□□□ 0.42
CLSTN1O94985 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLSTN1O94985 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLSTN1O94985 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLSTN1O94985 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.67■□□□□ 0.42
CLSTN1O94985 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.67■□□□□ 0.42
CLSTN1O94985 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.67■□□□□ 0.42
CLSTN1O94985 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.67■□□□□ 0.42
CLSTN1O94985 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.67■□□□□ 0.42
CLSTN1O94985 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC17.67■□□□□ 0.42
CLSTN1O94985 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLSTN1O94985 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.67■□□□□ 0.42
CLSTN1O94985 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.67■□□□□ 0.42
CLSTN1O94985 ADH5P3-201ENST00000433842 1137 ntBASIC17.67■□□□□ 0.42
CLSTN1O94985 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.67■□□□□ 0.42
CLSTN1O94985 DNAJB3-202ENST00000449667 1266 ntBASIC17.67■□□□□ 0.42
CLSTN1O94985 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.67■□□□□ 0.42
CLSTN1O94985 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLSTN1O94985 AP000344.2-201ENST00000512987 629 ntBASIC17.67■□□□□ 0.42
CLSTN1O94985 RNA5SP410-201ENST00000516285 106 ntBASIC17.67■□□□□ 0.42
CLSTN1O94985 AC105233.2-201ENST00000523697 349 ntBASIC17.67■□□□□ 0.42
CLSTN1O94985 AF228730.5-201ENST00000530288 346 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms