Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.04■□□□□ 0.16
KDELR3O43731 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
KDELR3O43731 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
KDELR3O43731 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
KDELR3O43731 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.04■□□□□ 0.16
KDELR3O43731 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.04■□□□□ 0.16
KDELR3O43731 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.04■□□□□ 0.16
KDELR3O43731 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.04■□□□□ 0.16
KDELR3O43731 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.04■□□□□ 0.16
KDELR3O43731 RARRES2P5-201ENST00000564013 466 ntBASIC16.04■□□□□ 0.16
KDELR3O43731 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.04■□□□□ 0.16
KDELR3O43731 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.04■□□□□ 0.16
KDELR3O43731 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.04■□□□□ 0.16
KDELR3O43731 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.04■□□□□ 0.16
KDELR3O43731 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.04■□□□□ 0.16
KDELR3O43731 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.04■□□□□ 0.16
KDELR3O43731 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
KDELR3O43731 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.04■□□□□ 0.16
KDELR3O43731 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDELR3O43731 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.03■□□□□ 0.16
KDELR3O43731 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.03■□□□□ 0.16
KDELR3O43731 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 SLC7A15P-201ENST00000424028 1363 ntBASIC16.03■□□□□ 0.16
KDELR3O43731 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
KDELR3O43731 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
KDELR3O43731 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.03■□□□□ 0.16
KDELR3O43731 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.03■□□□□ 0.16
KDELR3O43731 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 DFFBP1-201ENST00000433250 979 ntBASIC16.03■□□□□ 0.16
KDELR3O43731 AL353779.1-201ENST00000434793 351 ntBASIC16.03■□□□□ 0.16
KDELR3O43731 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.03■□□□□ 0.16
KDELR3O43731 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.03■□□□□ 0.16
KDELR3O43731 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.03■□□□□ 0.16
KDELR3O43731 AL132655.2-201ENST00000596276 594 ntBASIC16.03■□□□□ 0.16
KDELR3O43731 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.03■□□□□ 0.16
KDELR3O43731 AL391069.4-201ENST00000609583 481 ntBASIC16.03■□□□□ 0.16
KDELR3O43731 AL158212.4-201ENST00000624062 1286 ntBASIC16.03■□□□□ 0.16
KDELR3O43731 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
KDELR3O43731 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 AC007950.2-201ENST00000615045 2347 ntBASIC16.03■□□□□ 0.16
KDELR3O43731 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDELR3O43731 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 AL391825.1-201ENST00000457671 1364 ntBASIC16.02■□□□□ 0.16
KDELR3O43731 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.02■□□□□ 0.16
KDELR3O43731 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.02■□□□□ 0.16
KDELR3O43731 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
KDELR3O43731 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
KDELR3O43731 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
KDELR3O43731 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.02■□□□□ 0.16
KDELR3O43731 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.02■□□□□ 0.16
KDELR3O43731 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
KDELR3O43731 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
KDELR3O43731 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KDELR3O43731 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.02■□□□□ 0.16
KDELR3O43731 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
KDELR3O43731 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
KDELR3O43731 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms