Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FAM220BP-201ENST00000377689 816 ntBASIC14.15□□□□□ -0.14
SGCEO43556 HLA-H-201ENST00000383620 1096 ntBASIC14.15□□□□□ -0.14
SGCEO43556 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.15□□□□□ -0.14
SGCEO43556 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.15□□□□□ -0.14
SGCEO43556 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 YBX1P5-201ENST00000509441 847 ntBASIC14.15□□□□□ -0.14
SGCEO43556 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.15□□□□□ -0.14
SGCEO43556 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 MIR4469-201ENST00000583919 79 ntBASIC14.15□□□□□ -0.14
SGCEO43556 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.14□□□□□ -0.15
SGCEO43556 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.14□□□□□ -0.15
SGCEO43556 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 AP001282.1-201ENST00000531301 1499 ntBASIC14.14□□□□□ -0.15
SGCEO43556 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
SGCEO43556 GPX1P2-201ENST00000429271 606 ntBASIC14.14□□□□□ -0.15
SGCEO43556 AC005237.2-201ENST00000434368 219 ntBASIC14.14□□□□□ -0.15
SGCEO43556 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.14□□□□□ -0.15
SGCEO43556 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SGCEO43556 AC069335.1-201ENST00000489972 472 ntBASIC14.14□□□□□ -0.15
SGCEO43556 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 AC061975.2-201ENST00000581722 295 ntBASIC14.14□□□□□ -0.15
SGCEO43556 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
SGCEO43556 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SGCEO43556 AC022145.2-201ENST00000598203 171 ntBASIC14.14□□□□□ -0.15
SGCEO43556 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.14□□□□□ -0.15
SGCEO43556 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.14□□□□□ -0.15
SGCEO43556 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.14□□□□□ -0.15
SGCEO43556 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 AC105339.1-204ENST00000636249 355 ntBASIC14.14□□□□□ -0.15
SGCEO43556 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.14□□□□□ -0.15
SGCEO43556 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.14□□□□□ -0.15
SGCEO43556 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SGCEO43556 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SGCEO43556 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SGCEO43556 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SGCEO43556 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SGCEO43556 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SGCEO43556 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SGCEO43556 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.13□□□□□ -0.15
SGCEO43556 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms