Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
UPK1AO00322 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
UPK1AO00322 AC011477.6-201ENST00000604980 1927 ntBASIC15.07■□□□□ 0
UPK1AO00322 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UPK1AO00322 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
UPK1AO00322 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.07■□□□□ 0
UPK1AO00322 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.07■□□□□ 0
UPK1AO00322 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
UPK1AO00322 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.07■□□□□ 0
UPK1AO00322 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
UPK1AO00322 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
UPK1AO00322 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.07■□□□□ 0
UPK1AO00322 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.07■□□□□ 0
UPK1AO00322 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.07■□□□□ 0
UPK1AO00322 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.07■□□□□ 0
UPK1AO00322 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.07■□□□□ 0
UPK1AO00322 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.07■□□□□ 0
UPK1AO00322 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.07■□□□□ 0
UPK1AO00322 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.07■□□□□ 0
UPK1AO00322 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.07■□□□□ 0
UPK1AO00322 AC055717.3-201ENST00000622967 595 ntBASIC15.07■□□□□ 0
UPK1AO00322 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.07■□□□□ 0
UPK1AO00322 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UPK1AO00322 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.07■□□□□ 0
UPK1AO00322 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
UPK1AO00322 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UPK1AO00322 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.06■□□□□ 0
UPK1AO00322 AC007191.1-201ENST00000623179 2995 ntBASIC15.06■□□□□ 0
UPK1AO00322 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.06■□□□□ 0
UPK1AO00322 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.06■□□□□ 0
UPK1AO00322 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.06■□□□□ 0
UPK1AO00322 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 AL627223.1-201ENST00000416693 442 ntBASIC15.06■□□□□ 0
UPK1AO00322 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.06■□□□□ 0
UPK1AO00322 FAM58DP-201ENST00000428076 619 ntBASIC15.06■□□□□ 0
UPK1AO00322 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.06■□□□□ 0
UPK1AO00322 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.06■□□□□ 0
UPK1AO00322 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.06■□□□□ 0
UPK1AO00322 AP000344.2-201ENST00000512987 629 ntBASIC15.06■□□□□ 0
UPK1AO00322 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.06■□□□□ 0
UPK1AO00322 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.06■□□□□ 0
UPK1AO00322 AC093520.2-201ENST00000561830 333 ntBASIC15.06■□□□□ 0
UPK1AO00322 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
UPK1AO00322 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.06■□□□□ 0
UPK1AO00322 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.06■□□□□ 0
UPK1AO00322 AC005089.1-201ENST00000619486 2241 ntBASIC15.06■□□□□ 0
UPK1AO00322 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.06■□□□□ 0
UPK1AO00322 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.06■□□□□ 0
UPK1AO00322 AL691432.1-201ENST00000596308 1422 ntBASIC15.06■□□□□ 0
UPK1AO00322 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
UPK1AO00322 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.06■□□□□ 0
UPK1AO00322 C18orf15-201ENST00000623680 2534 ntBASIC15.06■□□□□ 0
UPK1AO00322 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.06■□□□□ 0
UPK1AO00322 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms