Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA3F8WFD2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 DFFBP1-201ENST00000433250 979 ntBASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 KRT17P7-201ENST00000451704 1104 ntBASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 AC245100.5-201ENST00000452108 331 ntBASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 SPDYE18-201ENST00000510091 1050 ntBASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 CR383656.12-201ENST00000549567 513 ntBASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA3F8WFD2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 AC087499.6-201ENST00000411576 835 ntBASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 COX5BP8-201ENST00000416911 349 ntBASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 AC004461.2-201ENST00000629517 803 ntBASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 AL136982.4-201ENST00000437689 1740 ntBASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms