Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 AL691432.1-201ENST00000596308 1422 ntBASIC15.94■□□□□ 0.14
CFAP99D6REC4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 AC008677.1-201ENST00000519230 1561 ntBASIC15.93■□□□□ 0.14
CFAP99D6REC4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 AC015911.4-201ENST00000588022 1070 ntBASIC15.93■□□□□ 0.14
CFAP99D6REC4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CFAP99D6REC4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CFAP99D6REC4 TUBB3P1-201ENST00000405796 1332 ntBASIC15.93■□□□□ 0.14
CFAP99D6REC4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 AC069224.1-201ENST00000566372 1715 ntBASIC15.92■□□□□ 0.14
CFAP99D6REC4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 MTND6P24-201ENST00000440466 518 ntBASIC15.92■□□□□ 0.14
CFAP99D6REC4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 AC125807.1-201ENST00000483097 614 ntBASIC15.92■□□□□ 0.14
CFAP99D6REC4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 AC093028.1-201ENST00000622998 982 ntBASIC15.92■□□□□ 0.14
CFAP99D6REC4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.92■□□□□ 0.14
CFAP99D6REC4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CFAP99D6REC4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms