Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 PTP4A1P2-201ENST00000546033 454 ntBASIC18.33■□□□□ 0.52
USP17L11C9JVI0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.33■□□□□ 0.52
USP17L11C9JVI0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 AC093525.8-201ENST00000624099 1342 ntBASIC18.32■□□□□ 0.52
USP17L11C9JVI0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 HNRNPUP1-201ENST00000554987 333 ntBASIC18.32■□□□□ 0.52
USP17L11C9JVI0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 AL049840.4-201ENST00000602422 811 ntBASIC18.32■□□□□ 0.52
USP17L11C9JVI0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
USP17L11C9JVI0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 AC005229.1-201ENST00000392885 409 ntBASIC18.31■□□□□ 0.52
USP17L11C9JVI0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 BCRP2-202ENST00000447763 634 ntBASIC18.31■□□□□ 0.52
USP17L11C9JVI0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 BCRP6-201ENST00000510112 632 ntBASIC18.31■□□□□ 0.52
USP17L11C9JVI0 BCRP7-201ENST00000511549 544 ntBASIC18.31■□□□□ 0.52
USP17L11C9JVI0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 AC068587.3-201ENST00000526613 355 ntBASIC18.31■□□□□ 0.52
USP17L11C9JVI0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 AC120045.2-201ENST00000567334 178 ntBASIC18.31■□□□□ 0.52
USP17L11C9JVI0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms