Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 AC107890.1-201ENST00000422478 521 ntBASIC16.19■□□□□ 0.18
CAPN8A6NHC0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN8A6NHC0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 AC002472.2-201ENST00000442739 958 ntBASIC16.18■□□□□ 0.18
CAPN8A6NHC0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 AC140878.1-201ENST00000565277 250 ntBASIC16.18■□□□□ 0.18
CAPN8A6NHC0 RN7SL828P-201ENST00000607615 303 ntBASIC16.18■□□□□ 0.18
CAPN8A6NHC0 AL133215.2-201ENST00000609242 977 ntBASIC16.18■□□□□ 0.18
CAPN8A6NHC0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 AC099063.4-201ENST00000641099 1602 ntBASIC16.18■□□□□ 0.18
CAPN8A6NHC0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.18■□□□□ 0.18
CAPN8A6NHC0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN8A6NHC0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 AP001282.1-201ENST00000531301 1499 ntBASIC16.17■□□□□ 0.18
CAPN8A6NHC0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN8A6NHC0 AL136982.4-201ENST00000437689 1740 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms