Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01546A6NGU7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.19□□□□□ -0.62
LINC01546A6NGU7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 KRT18P1-202ENST00000452408 1331 ntBASIC11.19□□□□□ -0.62
LINC01546A6NGU7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 GHSR-202ENST00000427970 912 ntBASIC11.19□□□□□ -0.62
LINC01546A6NGU7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC006011.2-201ENST00000621313 1158 ntBASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC018442.1-201ENST00000421439 2061 ntBASIC11.19□□□□□ -0.62
LINC01546A6NGU7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC006504.4-201ENST00000592118 1568 ntBASIC11.19□□□□□ -0.62
LINC01546A6NGU7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC015818.8-201ENST00000587907 1519 ntBASIC11.19□□□□□ -0.62
LINC01546A6NGU7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01546A6NGU7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms