Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 MIR648-201ENST00000385046 94 ntBASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 SLED1-202ENST00000512051 380 ntBASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 AC010319.3-201ENST00000597028 470 ntBASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 AC079776.1-201ENST00000401540 1152 ntBASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 AL442647.2-201ENST00000429864 857 ntBASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3FA6NER0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3FA6NER0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 AC124067.4-201ENST00000519691 2379 ntBASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 MIR658-201ENST00000385210 100 ntBASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 AC136604.1-201ENST00000418535 575 ntBASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms