Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MRPL3P1-201ENST00000400109 1033 ntBASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC004877.2-201ENST00000623941 599 ntBASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC041040.2-201ENST00000622926 2899 ntBASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 KRT19P2-202ENST00000557173 1012 ntBASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-7A0A0A0MS04 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC092127.1-201ENST00000567093 3455 ntBASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 AL450487.1-201ENST00000426799 995 ntBASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 AL662844.1-201ENST00000546340 181 ntBASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms