Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 AC092135.3-201ENST00000624151 1846 ntBASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.2■□□□□ 0.02
LRCH1Q9Y2L9 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 Z83836.1-201ENST00000624605 1642 ntBASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 KRT18P56-201ENST00000507275 550 ntBASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 AL390719.2-201ENST00000606993 987 ntBASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 AC016734.2-201ENST00000624325 1377 ntBASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRCH1Q9Y2L9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 IGHGP-201ENST00000390555 1178 ntBASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 RNF126P1-202ENST00000569893 925 ntBASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 AC090616.6-201ENST00000582640 721 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms