Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 BTNL10-201ENST00000595971 695 ntBASIC21.53■■□□□ 1.04
NINLQ9Y2I6 AC093813.1-201ENST00000605066 256 ntBASIC21.53■■□□□ 1.04
NINLQ9Y2I6 AL512343.1-201ENST00000605837 169 ntBASIC21.53■■□□□ 1.04
NINLQ9Y2I6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 KRT43P-201ENST00000434019 910 ntBASIC21.52■■□□□ 1.04
NINLQ9Y2I6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 AC009486.1-201ENST00000569860 813 ntBASIC21.52■■□□□ 1.04
NINLQ9Y2I6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 AC018665.1-201ENST00000622927 1362 ntBASIC21.52■■□□□ 1.04
NINLQ9Y2I6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 AL513523.2-202ENST00000427283 2040 ntBASIC21.52■■□□□ 1.04
NINLQ9Y2I6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NINLQ9Y2I6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NINLQ9Y2I6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC21.52■■□□□ 1.03
NINLQ9Y2I6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 ACTBP11-201ENST00000436287 1126 ntBASIC21.51■■□□□ 1.03
NINLQ9Y2I6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 AP001063.1-201ENST00000568332 529 ntBASIC21.51■■□□□ 1.03
NINLQ9Y2I6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NINLQ9Y2I6 AL391005.1-201ENST00000623953 2435 ntBASIC21.51■■□□□ 1.03
NINLQ9Y2I6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 AC012441.1-201ENST00000446669 685 ntBASIC21.5■■□□□ 1.03
NINLQ9Y2I6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 PTP4A1P2-201ENST00000546033 454 ntBASIC21.5■■□□□ 1.03
NINLQ9Y2I6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 AC133552.6-201ENST00000613406 534 ntBASIC21.5■■□□□ 1.03
NINLQ9Y2I6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms