Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 AC007431.3-201ENST00000623221 587 ntBASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 SDHAP3-202ENST00000515467 728 ntBASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 AC024267.1-201ENST00000582320 895 ntBASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 AC026979.3-201ENST00000607315 403 ntBASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PDZRN3Q9UPQ7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 SPDYE17-201ENST00000412399 783 ntBASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 AC044860.1-202ENST00000559481 777 ntBASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 SRD5A3P1-201ENST00000603021 949 ntBASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZRN3Q9UPQ7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
PDZRN3Q9UPQ7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.45■□□□□ 0.87
PDZRN3Q9UPQ7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 AL596257.1-201ENST00000641463 2694 ntBASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 TTTY23B-201ENST00000442790 549 ntBASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 AP005482.1-201ENST00000563722 1273 ntBASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 WASH4P-201ENST00000564273 1246 ntBASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 AC092384.3-202ENST00000564646 2873 ntBASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms