Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AC005622.1-201ENST00000636801 1703 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AL512384.1-201ENST00000406683 331 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AC055876.2-201ENST00000531834 546 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 TPRX2P-201ENST00000535362 881 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 HILS1-202ENST00000545329 423 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AC023310.3-201ENST00000557027 670 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AC100756.1-201ENST00000562736 682 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AC138749.3-201ENST00000567691 622 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AC116165.1-201ENST00000611806 668 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AC010491.1-201ENST00000563101 2797 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 AC092384.3-202ENST00000564646 2873 ntBASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HDAC6Q9UBN7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 GPR53P-205ENST00000457298 1084 ntBASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 IGHV3-71-201ENST00000523324 359 ntBASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 MIR6752-201ENST00000618442 71 ntBASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HDAC6Q9UBN7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms