Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNTN3Q9P232 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTN3Q9P232 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTN3Q9P232 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTN3Q9P232 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNTN3Q9P232 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTN3Q9P232 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTN3Q9P232 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.02■□□□□ 0.32
CNTN3Q9P232 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTN3Q9P232 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.02■□□□□ 0.32
CNTN3Q9P232 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTN3Q9P232 AC104596.2-201ENST00000512793 793 ntBASIC17.02■□□□□ 0.32
CNTN3Q9P232 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.02■□□□□ 0.32
CNTN3Q9P232 AC092552.1-201ENST00000547243 906 ntBASIC17.02■□□□□ 0.32
CNTN3Q9P232 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTN3Q9P232 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTN3Q9P232 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTN3Q9P232 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTN3Q9P232 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTN3Q9P232 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTN3Q9P232 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CNTN3Q9P232 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.02■□□□□ 0.31
CNTN3Q9P232 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.02■□□□□ 0.31
CNTN3Q9P232 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
CNTN3Q9P232 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.02■□□□□ 0.31
CNTN3Q9P232 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTN3Q9P232 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.01■□□□□ 0.31
CNTN3Q9P232 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 AC000095.1-201ENST00000603208 874 ntBASIC17.01■□□□□ 0.31
CNTN3Q9P232 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNTN3Q9P232 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTN3Q9P232 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17■□□□□ 0.31
CNTN3Q9P232 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17■□□□□ 0.31
CNTN3Q9P232 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNTN3Q9P232 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17■□□□□ 0.31
CNTN3Q9P232 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17■□□□□ 0.31
CNTN3Q9P232 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CNTN3Q9P232 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CNTN3Q9P232 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
CNTN3Q9P232 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNTN3Q9P232 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17■□□□□ 0.31
CNTN3Q9P232 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17■□□□□ 0.31
CNTN3Q9P232 RN7SL752P-201ENST00000463779 287 ntBASIC17■□□□□ 0.31
CNTN3Q9P232 KRT18P43-201ENST00000469825 1281 ntBASIC17■□□□□ 0.31
CNTN3Q9P232 FAM86LP-201ENST00000478302 853 ntBASIC17■□□□□ 0.31
CNTN3Q9P232 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CNTN3Q9P232 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17■□□□□ 0.31
CNTN3Q9P232 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNTN3Q9P232 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CNTN3Q9P232 WFDC1-204ENST00000613603 549 ntBASIC17■□□□□ 0.31
CNTN3Q9P232 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17■□□□□ 0.31
CNTN3Q9P232 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNTN3Q9P232 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNTN3Q9P232 OR6D1P-203ENST00000641209 4860 ntBASIC17■□□□□ 0.31
CNTN3Q9P232 AL121723.1-201ENST00000445194 1519 ntBASIC17■□□□□ 0.31
CNTN3Q9P232 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17■□□□□ 0.31
CNTN3Q9P232 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17■□□□□ 0.31
CNTN3Q9P232 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTN3Q9P232 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNTN3Q9P232 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CNTN3Q9P232 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms