Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FBXO28Q9NVF7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FBXO28Q9NVF7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.14■□□□□ 0.5
FBXO28Q9NVF7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
FBXO28Q9NVF7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
FBXO28Q9NVF7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 AP003680.1-201ENST00000598970 3660 ntBASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 MTHFR-217ENST00000641820 1569 ntBASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 PTP4A1P2-201ENST00000546033 454 ntBASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 AL022328.1-201ENST00000610050 478 ntBASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 DRD5P1-201ENST00000456605 1438 ntBASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
FBXO28Q9NVF7 AC124067.4-201ENST00000519691 2379 ntBASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 AC069224.1-201ENST00000566372 1715 ntBASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 AC005229.1-201ENST00000392885 409 ntBASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 AC093433.1-201ENST00000458048 571 ntBASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.13■□□□□ 0.49
FBXO28Q9NVF7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 AC092933.1-201ENST00000393644 945 ntBASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 AC099336.1-201ENST00000417053 1171 ntBASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 KLF2P4-201ENST00000451959 1225 ntBASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 AC106760.1-201ENST00000508690 800 ntBASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 AC026410.3-201ENST00000514280 936 ntBASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.12■□□□□ 0.49
FBXO28Q9NVF7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms