Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 MKNK2P1-201ENST00000437526 628 ntBASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 MIR3687-2-201ENST00000577708 61 ntBASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 AL009183.1-201ENST00000603760 355 ntBASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 MIR3687-1-201ENST00000614492 61 ntBASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 AL161645.1-201ENST00000622716 1255 ntBASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 AP001282.1-201ENST00000531301 1499 ntBASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 AC136621.1-201ENST00000624017 2304 ntBASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LIN7CQ9NUP9 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.27□□□□□ -0.28
LIN7CQ9NUP9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 ACTG1P14-201ENST00000446382 1122 ntBASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 KRT18P34-201ENST00000488218 1270 ntBASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 C20orf181-201ENST00000623918 480 ntBASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 AC092850.2-201ENST00000623821 2697 ntBASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms