Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 LINC00638-201ENST00000555578 2518 ntBASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 AC105250.1-201ENST00000509378 2057 ntBASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 AP000437.1-201ENST00000624057 2085 ntBASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 SYT6-210ENST00000641643 1587 ntBASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 AC092139.4-201ENST00000624318 2794 ntBASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 STK25-235ENST00000543554 2556 ntTSL 2 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 DLX4-206ENST00000611342 1662 ntBASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 DBI-210ENST00000542275 757 ntTSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 KRT8P3-201ENST00000519669 1449 ntBASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 AC010336.1-201ENST00000539278 4739 ntBASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDC42SE1Q9NRR8 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms