Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AP001282.1-201ENST00000531301 1499 ntBASIC16.77■□□□□ 0.28
TLR9Q9NR96 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TLR9Q9NR96 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TLR9Q9NR96 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TLR9Q9NR96 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TLR9Q9NR96 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TLR9Q9NR96 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.77■□□□□ 0.27
TLR9Q9NR96 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TLR9Q9NR96 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
TLR9Q9NR96 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TLR9Q9NR96 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TLR9Q9NR96 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TLR9Q9NR96 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TLR9Q9NR96 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TLR9Q9NR96 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TLR9Q9NR96 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 MIR1247-201ENST00000408206 136 ntBASIC16.76■□□□□ 0.27
TLR9Q9NR96 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 GOLGA2P4-201ENST00000441462 777 ntBASIC16.76■□□□□ 0.27
TLR9Q9NR96 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 DUX4L45-201ENST00000566406 1057 ntBASIC16.76■□□□□ 0.27
TLR9Q9NR96 MIR3615-201ENST00000581999 87 ntBASIC16.76■□□□□ 0.27
TLR9Q9NR96 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR9Q9NR96 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR9Q9NR96 REXO1L8P-201ENST00000604378 1897 ntBASIC16.76■□□□□ 0.27
TLR9Q9NR96 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 FLJ38576-201ENST00000623820 2459 ntBASIC16.75■□□□□ 0.27
TLR9Q9NR96 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 PCDH8P1-201ENST00000428983 2773 ntBASIC16.75■□□□□ 0.27
TLR9Q9NR96 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 GPAA1P2-201ENST00000417923 928 ntBASIC16.75■□□□□ 0.27
TLR9Q9NR96 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 KRT18P43-201ENST00000469825 1281 ntBASIC16.75■□□□□ 0.27
TLR9Q9NR96 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 HNRNPUP1-201ENST00000554987 333 ntBASIC16.75■□□□□ 0.27
TLR9Q9NR96 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 AC000095.1-201ENST00000603208 874 ntBASIC16.75■□□□□ 0.27
TLR9Q9NR96 AC091271.1-201ENST00000611877 1162 ntBASIC16.75■□□□□ 0.27
TLR9Q9NR96 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 AL139099.5-201ENST00000635274 300 ntBASIC16.75■□□□□ 0.27
TLR9Q9NR96 AC008687.7-202ENST00000637404 953 ntBASIC16.75■□□□□ 0.27
TLR9Q9NR96 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TLR9Q9NR96 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TLR9Q9NR96 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms