Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CPNE5Q9HCH3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 SLC7A15P-201ENST00000424028 1363 ntBASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 RN7SL618P-201ENST00000477850 296 ntBASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 BANF1P1-201ENST00000553684 263 ntBASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 MIR4538-201ENST00000581377 78 ntBASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 AC099568.2-201ENST00000609194 695 ntBASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 AC133552.6-201ENST00000613406 534 ntBASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE5Q9HCH3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 AC092171.3-201ENST00000610122 2651 ntBASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 SNX29P1-201ENST00000548357 1007 ntBASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 AC044860.1-202ENST00000559481 777 ntBASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.41■□□□□ 0.06
CPNE5Q9HCH3 AC013467.2-201ENST00000605472 835 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms