Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 PTCHD3P3-201ENST00000403073 906 ntBASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 PCED1CP-201ENST00000419887 785 ntBASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 KRT16P4-201ENST00000453883 522 ntBASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 AC106795.1-205ENST00000512851 1056 ntBASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 BSG-214ENST00000614867 960 ntTSL 3 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 LINC00528-201ENST00000600723 2160 ntBASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 CICP4-201ENST00000447359 2812 ntBASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 IER3-202ENST00000376377 1350 ntBASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 HCG4-201ENST00000418983 998 ntBASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 SLC9A3P2-201ENST00000447821 2021 ntBASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 SLC25A6P2-201ENST00000497974 877 ntBASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 FICD-205ENST00000552758 603 ntTSL 2 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms