Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 DRD5P1-201ENST00000456605 1438 ntBASIC17.26■□□□□ 0.35
HIPK3Q9H422 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 AC134407.2-201ENST00000625089 1978 ntBASIC17.26■□□□□ 0.35
HIPK3Q9H422 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 AC006001.1-201ENST00000325130 474 ntBASIC17.25■□□□□ 0.35
HIPK3Q9H422 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 BTBD6P1-201ENST00000412176 1267 ntBASIC17.25■□□□□ 0.35
HIPK3Q9H422 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 FAM197Y7-201ENST00000432892 766 ntBASIC17.25■□□□□ 0.35
HIPK3Q9H422 AC007969.1-201ENST00000433675 447 ntBASIC17.25■□□□□ 0.35
HIPK3Q9H422 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 AC106872.11-201ENST00000605838 421 ntBASIC17.25■□□□□ 0.35
HIPK3Q9H422 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.25■□□□□ 0.35
HIPK3Q9H422 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIPK3Q9H422 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 AC018695.7-201ENST00000624587 2492 ntBASIC17.24■□□□□ 0.35
HIPK3Q9H422 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 AC078819.1-201ENST00000547454 765 ntBASIC17.24■□□□□ 0.35
HIPK3Q9H422 AC012085.1-201ENST00000548270 765 ntBASIC17.24■□□□□ 0.35
HIPK3Q9H422 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 MIR4741-201ENST00000579822 90 ntBASIC17.24■□□□□ 0.35
HIPK3Q9H422 RN7SL190P-201ENST00000582519 257 ntBASIC17.24■□□□□ 0.35
HIPK3Q9H422 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 AC107373.2-201ENST00000607735 490 ntBASIC17.24■□□□□ 0.35
HIPK3Q9H422 AL008638.5-201ENST00000623814 1298 ntBASIC17.24■□□□□ 0.35
HIPK3Q9H422 AC244452.3-201ENST00000636814 210 ntBASIC17.24■□□□□ 0.35
HIPK3Q9H422 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.24■□□□□ 0.35
HIPK3Q9H422 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIPK3Q9H422 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.24■□□□□ 0.35
HIPK3Q9H422 RNF216P1-203ENST00000404404 2427 ntBASIC17.23■□□□□ 0.35
HIPK3Q9H422 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms