Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 AC106730.1-201ENST00000566722 1090 ntBASIC15.92■□□□□ 0.14
CPNE1Q99829 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.92■□□□□ 0.14
CPNE1Q99829 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 BX640515.1-201ENST00000617215 977 ntBASIC15.92■□□□□ 0.14
CPNE1Q99829 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE1Q99829 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CPNE1Q99829 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE1Q99829 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CPNE1Q99829 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CPNE1Q99829 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPNE1Q99829 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPNE1Q99829 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.91■□□□□ 0.14
CPNE1Q99829 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.91■□□□□ 0.14
CPNE1Q99829 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 MIR346-201ENST00000362234 95 ntBASIC15.91■□□□□ 0.14
CPNE1Q99829 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CPNE1Q99829 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.91■□□□□ 0.14
CPNE1Q99829 ADH5P3-201ENST00000433842 1137 ntBASIC15.91■□□□□ 0.14
CPNE1Q99829 EEF1DP4-201ENST00000446006 880 ntBASIC15.91■□□□□ 0.14
CPNE1Q99829 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.91■□□□□ 0.14
CPNE1Q99829 AL139010.1-201ENST00000454878 894 ntBASIC15.91■□□□□ 0.14
CPNE1Q99829 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.91■□□□□ 0.14
CPNE1Q99829 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.91■□□□□ 0.14
CPNE1Q99829 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.91■□□□□ 0.14
CPNE1Q99829 AP000842.3-202ENST00000569238 1080 ntBASIC15.91■□□□□ 0.14
CPNE1Q99829 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 AC092902.6-201ENST00000641783 218 ntBASIC15.91■□□□□ 0.14
CPNE1Q99829 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 KRT8P37-201ENST00000451609 1420 ntBASIC15.91■□□□□ 0.14
CPNE1Q99829 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CPNE1Q99829 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPNE1Q99829 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 CYP4F24P-201ENST00000586049 1580 ntBASIC15.91■□□□□ 0.14
CPNE1Q99829 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.91■□□□□ 0.14
CPNE1Q99829 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPNE1Q99829 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPNE1Q99829 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE1Q99829 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.91■□□□□ 0.14
CPNE1Q99829 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CPNE1Q99829 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE1Q99829 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CPNE1Q99829 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE1Q99829 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE1Q99829 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CPNE1Q99829 AP002414.2-201ENST00000591780 3365 ntBASIC15.9■□□□□ 0.14
CPNE1Q99829 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE1Q99829 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE1Q99829 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.9■□□□□ 0.14
CPNE1Q99829 AL645939.2-201ENST00000427340 991 ntBASIC15.9■□□□□ 0.14
CPNE1Q99829 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE1Q99829 FAM58CP-201ENST00000435741 640 ntBASIC15.9■□□□□ 0.14
CPNE1Q99829 PHKG1P2-201ENST00000457537 863 ntBASIC15.9■□□□□ 0.14
CPNE1Q99829 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE1Q99829 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.9■□□□□ 0.14
CPNE1Q99829 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms