Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 AC025678.2-201ENST00000562061 970 ntBASIC18.8■□□□□ 0.6
NEK1Q96PY6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.79■□□□□ 0.6
NEK1Q96PY6 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.79■□□□□ 0.6
NEK1Q96PY6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 RPL37AP1-201ENST00000412502 279 ntBASIC18.79■□□□□ 0.6
NEK1Q96PY6 AL080243.2-201ENST00000418783 582 ntBASIC18.79■□□□□ 0.6
NEK1Q96PY6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 CNN2P2-201ENST00000443536 909 ntBASIC18.79■□□□□ 0.6
NEK1Q96PY6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 CNN2P3-201ENST00000450201 906 ntBASIC18.79■□□□□ 0.6
NEK1Q96PY6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 AL136317.3-201ENST00000618497 906 ntBASIC18.79■□□□□ 0.6
NEK1Q96PY6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 TMBIM7P-203ENST00000641617 1718 ntBASIC18.79■□□□□ 0.6
NEK1Q96PY6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 AC087481.3-201ENST00000602886 1894 ntBASIC18.79■□□□□ 0.6
NEK1Q96PY6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 AC127383.1-201ENST00000444697 1800 ntBASIC18.79■□□□□ 0.6
NEK1Q96PY6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEK1Q96PY6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NEK1Q96PY6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NEK1Q96PY6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.78■□□□□ 0.6
NEK1Q96PY6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.78■□□□□ 0.6
NEK1Q96PY6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.78■□□□□ 0.6
NEK1Q96PY6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.78■□□□□ 0.6
NEK1Q96PY6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.78■□□□□ 0.6
NEK1Q96PY6 AC104640.1-201ENST00000562617 2109 ntBASIC18.78■□□□□ 0.6
NEK1Q96PY6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.78■□□□□ 0.6
NEK1Q96PY6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.78■□□□□ 0.6
NEK1Q96PY6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NEK1Q96PY6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
NEK1Q96PY6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEK1Q96PY6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEK1Q96PY6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.77■□□□□ 0.6
NEK1Q96PY6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms