Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 AC106881.1-201ENST00000605849 3329 ntBASIC12.11□□□□□ -0.47
AP1S3Q96PC3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 AP000867.4-201ENST00000641616 219 ntBASIC12.11□□□□□ -0.47
AP1S3Q96PC3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 AL671710.1-201ENST00000610245 2349 ntBASIC12.11□□□□□ -0.47
AP1S3Q96PC3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 KRT18P1-202ENST00000452408 1331 ntBASIC12.11□□□□□ -0.47
AP1S3Q96PC3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 BNIP3P18-201ENST00000593976 575 ntBASIC12.1□□□□□ -0.47
AP1S3Q96PC3 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.1□□□□□ -0.47
AP1S3Q96PC3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 AC073592.4-201ENST00000623827 446 ntBASIC12.1□□□□□ -0.47
AP1S3Q96PC3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP1S3Q96PC3 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms