Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 AC093813.1-201ENST00000605066 256 ntBASIC18.4■□□□□ 0.54
CCDC17Q96LX7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 MIR6805-201ENST00000615055 62 ntBASIC18.4■□□□□ 0.54
CCDC17Q96LX7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC17Q96LX7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC17Q96LX7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CCDC17Q96LX7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC17Q96LX7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.39■□□□□ 0.53
CCDC17Q96LX7 KRT43P-201ENST00000434019 910 ntBASIC18.39■□□□□ 0.53
CCDC17Q96LX7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 AC022210.1-201ENST00000449856 793 ntBASIC18.39■□□□□ 0.53
CCDC17Q96LX7 TDH-203ENST00000531764 1110 ntBASIC18.39■□□□□ 0.53
CCDC17Q96LX7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 AC009486.1-201ENST00000569860 813 ntBASIC18.39■□□□□ 0.53
CCDC17Q96LX7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC17Q96LX7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 AC018695.7-201ENST00000624587 2492 ntBASIC18.38■□□□□ 0.53
CCDC17Q96LX7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 AC234783.1-201ENST00000441761 496 ntBASIC18.38■□□□□ 0.53
CCDC17Q96LX7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 PTP4A1P2-201ENST00000546033 454 ntBASIC18.38■□□□□ 0.53
CCDC17Q96LX7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 AL603832.2-201ENST00000566195 2125 ntBASIC18.38■□□□□ 0.53
CCDC17Q96LX7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC17Q96LX7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC17Q96LX7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC17Q96LX7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC17Q96LX7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC17Q96LX7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC17Q96LX7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC17Q96LX7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms