Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AP000842.3-202ENST00000569238 1080 ntBASIC16.46■□□□□ 0.23
IFT43Q96FT9 AC024267.1-201ENST00000582320 895 ntBASIC16.46■□□□□ 0.23
IFT43Q96FT9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 AC138649.4-201ENST00000612222 287 ntBASIC16.46■□□□□ 0.23
IFT43Q96FT9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
IFT43Q96FT9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
IFT43Q96FT9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
IFT43Q96FT9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.45■□□□□ 0.22
IFT43Q96FT9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 TNRC18P2-201ENST00000417666 2714 ntBASIC16.45■□□□□ 0.22
IFT43Q96FT9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 MIR648-201ENST00000385046 94 ntBASIC16.45■□□□□ 0.22
IFT43Q96FT9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 AC107890.1-201ENST00000422478 521 ntBASIC16.45■□□□□ 0.22
IFT43Q96FT9 BASP1P1-201ENST00000430708 665 ntBASIC16.45■□□□□ 0.22
IFT43Q96FT9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 RNA5SP410-201ENST00000516285 106 ntBASIC16.45■□□□□ 0.22
IFT43Q96FT9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 DUX4L27-201ENST00000554796 1261 ntBASIC16.45■□□□□ 0.22
IFT43Q96FT9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IFT43Q96FT9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT43Q96FT9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 AC142381.1-201ENST00000426099 345 ntBASIC16.44■□□□□ 0.22
IFT43Q96FT9 SPDYE14P-201ENST00000442619 822 ntBASIC16.44■□□□□ 0.22
IFT43Q96FT9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 AL390955.2-201ENST00000603032 514 ntBASIC16.44■□□□□ 0.22
IFT43Q96FT9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 AC067930.6-201ENST00000623257 4947 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms