Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SMIM12Q96EX1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 FGD5P1-202ENST00000614866 2498 ntBASIC12.18□□□□□ -0.46
SMIM12Q96EX1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 NSUN5P1-202ENST00000421140 1535 ntBASIC12.18□□□□□ -0.46
SMIM12Q96EX1 NSUN5P2-203ENST00000457352 1529 ntBASIC12.18□□□□□ -0.46
SMIM12Q96EX1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 KRT17P6-201ENST00000453795 1220 ntBASIC12.18□□□□□ -0.46
SMIM12Q96EX1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 AC107918.2-201ENST00000530817 355 ntBASIC12.18□□□□□ -0.46
SMIM12Q96EX1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 AL136038.3-201ENST00000561909 1096 ntBASIC12.18□□□□□ -0.46
SMIM12Q96EX1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMIM12Q96EX1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SMIM12Q96EX1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms