Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 SPDYE17-201ENST00000412399 783 ntBASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 CNN2P11-201ENST00000429351 262 ntBASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 HNRNPUP1-201ENST00000554987 333 ntBASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 AC097359.3-201ENST00000603982 1210 ntBASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 AL133215.2-201ENST00000609242 977 ntBASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 AP001059.3-201ENST00000619053 235 ntBASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 AC134684.3-201ENST00000641758 218 ntBASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RHBDF1Q96CC6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 AZGP1P1-201ENST00000411909 902 ntBASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 RN7SL828P-201ENST00000607615 303 ntBASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 AC009090.5-201ENST00000624886 2285 ntBASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 AL035456.1-201ENST00000456064 1369 ntBASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RHBDF1Q96CC6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RHBDF1Q96CC6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms