Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 FO393414.2-201ENST00000405153 598 ntBASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 AC007679.1-201ENST00000458609 502 ntBASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 AACSP1-202ENST00000521412 1095 ntBASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 STK24P1-201ENST00000455035 1291 ntBASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 AC108860.2-201ENST00000562760 2183 ntBASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC6.22□□□□□ -1.41
SYNE2Q8WXH0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 RFNG-202ENST00000429557 994 ntTSL 5 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 MECP2-226ENST00000640414 897 ntTSL 5 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 RN7SL838P-201ENST00000481676 295 ntBASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 AC000095.1-201ENST00000603208 874 ntBASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE2Q8WXH0 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 RN7SKP109-201ENST00000410592 316 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 RN7SL478P-201ENST00000584358 298 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 LRRC59-203ENST00000576448 1531 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC022532.1-201ENST00000624563 1728 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC108734.2-201ENST00000420887 1069 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AL590556.2-202ENST00000636906 844 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms