Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 TMBIM7P-203ENST00000641617 1718 ntBASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 AL607033.1-201ENST00000623900 1599 ntBASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 AC136604.1-201ENST00000418535 575 ntBASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 AC127383.1-201ENST00000444697 1800 ntBASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDH19Q8TAB3 AC087481.3-201ENST00000602886 1894 ntBASIC16.39■□□□□ 0.22
PCDH19Q8TAB3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PCDH19Q8TAB3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDH19Q8TAB3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDH19Q8TAB3 KRT8P12-202ENST00000472924 1397 ntBASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 FAM8A3P-201ENST00000427218 844 ntBASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 AL079307.3-201ENST00000556114 283 ntBASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH19Q8TAB3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms