Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 ZBED1P1-201ENST00000502364 1930 ntBASIC11.94□□□□□ -0.5
NUP35Q8NFH5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 HCG4-201ENST00000418983 998 ntBASIC11.94□□□□□ -0.5
NUP35Q8NFH5 TSPY5P-201ENST00000426936 936 ntBASIC11.94□□□□□ -0.5
NUP35Q8NFH5 AC117947.1-201ENST00000427448 529 ntBASIC11.94□□□□□ -0.5
NUP35Q8NFH5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 AC245100.5-201ENST00000452108 331 ntBASIC11.94□□□□□ -0.5
NUP35Q8NFH5 AC096582.2-201ENST00000510860 516 ntBASIC11.94□□□□□ -0.5
NUP35Q8NFH5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 AF228730.7-201ENST00000641842 219 ntBASIC11.94□□□□□ -0.5
NUP35Q8NFH5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
NUP35Q8NFH5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.93□□□□□ -0.5
NUP35Q8NFH5 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 AC083849.1-201ENST00000615227 514 ntBASIC11.93□□□□□ -0.5
NUP35Q8NFH5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 INTS4P1-203ENST00000641008 3683 ntBASIC11.93□□□□□ -0.5
NUP35Q8NFH5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.93□□□□□ -0.5
NUP35Q8NFH5 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms