Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 RPL17P11-201ENST00000417593 544 ntBASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 MIR5572-201ENST00000583188 137 ntBASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 AC093813.1-201ENST00000605066 256 ntBASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 AL451050.2-201ENST00000606967 682 ntBASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 FZD10-202ENST00000539839 3282 ntBASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 AL662844.4-201ENST00000606367 2838 ntBASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 FNTAP2-201ENST00000430308 634 ntBASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 AC018635.2-201ENST00000608625 364 ntBASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 AC138649.2-201ENST00000615886 705 ntBASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CFAP43Q8NDM7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CFAP43Q8NDM7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC24.32■■□□□ 1.48
CFAP43Q8NDM7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 KRTAP19-9P-201ENST00000421795 191 ntBASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 POM121L10P-201ENST00000436994 1285 ntBASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 FTLP10-202ENST00000505798 471 ntBASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CFAP43Q8NDM7 ACKR1-201ENST00000368121 1240 ntBASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms