Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 YBX1P5-201ENST00000509441 847 ntBASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 SLC25A39P2-201ENST00000537614 270 ntBASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 UXT-AS1-201ENST00000590504 1525 ntBASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 TMBIM7P-203ENST00000641617 1718 ntBASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 SSR4P1-203ENST00000599569 2260 ntBASIC14.61□□□□□ -0.07
LSMEM1Q8N8F7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 AC015656.1-201ENST00000624209 3578 ntBASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 RARRES2P9-201ENST00000565168 469 ntBASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 AC022145.2-201ENST00000598203 171 ntBASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 AC079781.5-202ENST00000641784 3743 ntBASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.6□□□□□ -0.07
LSMEM1Q8N8F7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms