Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 ELK2AP-201ENST00000392510 1007 ntBASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 AC022748.3-201ENST00000621828 275 ntBASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 AP001002.3-201ENST00000623482 206 ntBASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 AC007787.1-201ENST00000588095 1583 ntBASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 AC114812.1-204ENST00000449669 728 ntBASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 AC079328.1-201ENST00000560358 952 ntBASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 AL645937.2-201ENST00000396808 931 ntBASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 AC126915.1-201ENST00000522847 1038 ntBASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL27A1Q8IZC6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 AC091046.1-201ENST00000331871 207 ntBASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 CYP46A4P-201ENST00000414953 267 ntBASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 FNTAP2-201ENST00000430308 634 ntBASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 CLUHP2-201ENST00000426660 1303 ntBASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms