Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 IL9RP2-201ENST00000423948 1312 ntBASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 PDPK2P-202ENST00000562415 1191 ntBASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 MIR4321-201ENST00000592276 80 ntBASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 AL513190.1-201ENST00000621254 727 ntBASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 MYO15B-237ENST00000642007 4893 ntBASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC50Q8IVM0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 AC002056.1-201ENST00000395613 760 ntBASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 AC112191.1-201ENST00000523689 701 ntBASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 ZNF259P1-201ENST00000407656 1365 ntBASIC16.86■□□□□ 0.29
CCDC50Q8IVM0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms