Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 AC006011.2-201ENST00000621313 1158 ntBASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 AC023024.2-201ENST00000623561 1993 ntBASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 INTS4P1-203ENST00000641008 3683 ntBASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 AC097359.2-201ENST00000604992 2389 ntBASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD2Q8IV50 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 SIGLEC16-201ENST00000599858 1437 ntBASIC14□□□□□ -0.17
LYSMD2Q8IV50 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 AL596275.1-201ENST00000423464 877 ntBASIC14□□□□□ -0.17
LYSMD2Q8IV50 AC092647.4-201ENST00000457211 535 ntBASIC14□□□□□ -0.17
LYSMD2Q8IV50 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms