Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFX6Q8HWS3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFX6Q8HWS3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFX6Q8HWS3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RFX6Q8HWS3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.58■□□□□ 0.25
RFX6Q8HWS3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFX6Q8HWS3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.58■□□□□ 0.25
RFX6Q8HWS3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 DNAJB3-201ENST00000446806 729 ntBASIC16.58■□□□□ 0.24
RFX6Q8HWS3 AL139010.1-201ENST00000454878 894 ntBASIC16.58■□□□□ 0.24
RFX6Q8HWS3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFX6Q8HWS3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 AC022145.2-201ENST00000598203 171 ntBASIC16.57■□□□□ 0.24
RFX6Q8HWS3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 AC105339.1-204ENST00000636249 355 ntBASIC16.57■□□□□ 0.24
RFX6Q8HWS3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RFX6Q8HWS3 AC087481.3-201ENST00000602886 1894 ntBASIC16.56■□□□□ 0.24
RFX6Q8HWS3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 AL596257.1-201ENST00000641463 2694 ntBASIC16.56■□□□□ 0.24
RFX6Q8HWS3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RFX6Q8HWS3 RARRES2P9-201ENST00000565168 469 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms