Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL607033.1-201ENST00000623900 1599 ntBASIC17.68■□□□□ 0.42
TRIM50Q86XT4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 MIR1909-201ENST00000411312 80 ntBASIC17.67■□□□□ 0.42
TRIM50Q86XT4 AC136604.1-201ENST00000418535 575 ntBASIC17.67■□□□□ 0.42
TRIM50Q86XT4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.67■□□□□ 0.42
TRIM50Q86XT4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 AC097359.3-201ENST00000603982 1210 ntBASIC17.67■□□□□ 0.42
TRIM50Q86XT4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM50Q86XT4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 AC007389.4-201ENST00000454674 793 ntBASIC17.66■□□□□ 0.42
TRIM50Q86XT4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 FAM86LP-201ENST00000478302 853 ntBASIC17.66■□□□□ 0.42
TRIM50Q86XT4 RAB43P1-201ENST00000561790 589 ntBASIC17.66■□□□□ 0.42
TRIM50Q86XT4 AC010319.3-201ENST00000597028 470 ntBASIC17.66■□□□□ 0.42
TRIM50Q86XT4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms