Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 AC092865.6-201ENST00000642101 219 ntBASIC14.23□□□□□ -0.13
LRRC28Q86X40 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 BCAR1-209ENST00000546196 1340 ntBASIC14.22□□□□□ -0.13
LRRC28Q86X40 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
LRRC28Q86X40 AC008677.1-201ENST00000519230 1561 ntBASIC14.22□□□□□ -0.13
LRRC28Q86X40 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRC28Q86X40 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 UPF3AP3-201ENST00000420996 769 ntBASIC14.21□□□□□ -0.13
LRRC28Q86X40 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 KRT19P2-202ENST00000557173 1012 ntBASIC14.21□□□□□ -0.13
LRRC28Q86X40 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.21□□□□□ -0.13
LRRC28Q86X40 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 GPALPP1-207ENST00000611650 899 ntBASIC14.21□□□□□ -0.13
LRRC28Q86X40 ACTL9-202ENST00000612068 1252 ntBASIC14.21□□□□□ -0.13
LRRC28Q86X40 AC006538.3-201ENST00000612495 578 ntBASIC14.21□□□□□ -0.13
LRRC28Q86X40 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.21□□□□□ -0.13
LRRC28Q86X40 REXO1L3P-201ENST00000622202 1288 ntBASIC14.21□□□□□ -0.13
LRRC28Q86X40 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 LINC00528-201ENST00000600723 2160 ntBASIC14.21□□□□□ -0.13
LRRC28Q86X40 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 AC025580.3-201ENST00000617932 1424 ntBASIC14.21□□□□□ -0.13
LRRC28Q86X40 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRRC28Q86X40 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRRC28Q86X40 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
LRRC28Q86X40 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRRC28Q86X40 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRRC28Q86X40 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LRRC28Q86X40 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.21□□□□□ -0.14
LRRC28Q86X40 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.21□□□□□ -0.14
LRRC28Q86X40 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRRC28Q86X40 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRRC28Q86X40 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
LRRC28Q86X40 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms