Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 LINC00528-201ENST00000600723 2160 ntBASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 PMS2P7-201ENST00000506558 1336 ntBASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AL161772.1-201ENST00000610494 4412 ntBASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 IGLL3P-201ENST00000412472 434 ntBASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 AC018712.1-201ENST00000455767 687 ntBASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 MIR4751-201ENST00000578027 74 ntBASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 AC007191.1-201ENST00000623179 2995 ntBASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRTM1Q86UE6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 AC232323.1-201ENST00000540724 2099 ntBASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 REXO1L5P-201ENST00000622260 2098 ntBASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 LINC00552-201ENST00000625151 2579 ntBASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRTM1Q86UE6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms